CHEM 240: Introduction to
Bioanalytical Chemistry

J. D. Cronk
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11. header

Lecture 11. Review

Friday 10 February 2006

Catch-up day and review for Exam 1 .

Reading: none assigned.

 

11. Summary

Lecture 11 summary

As a further example of a triprotic amino acid, we consider the basic amino acid arginine. As the structures in the figure below show, at low pH the a-amino and a-carboxyl groups are protonated, and the positively charged guanidinium group is in its protonated form as well. Raising the pH (equivalent to titrating arginine dihydrochoride with strong base) converts some of the fully-protonated (H3B2+) form to H2B+ by loss of the proton of the a-carboxyl group as the pH approaches the pKa of the a-carboxyl group. The carboxyl and carboxylate forms are in equlibrium when pH = pKa1. The concentrations of the other forms are still negligible. However, when the titration reaches its first equivalence point, the intermediate species H2B+ is the predominant species, with smaller (and approximately equal) amounts of H3B2+ and HB. The pH calculation for the intermediate species case is roughly concentration-independent (for our typical applications), and here consists of averaging pKa1 and pKa2.

Arginine, acid-base equilibria. Four structures, with names and pKa values
Continuing with our titration of arginine, when pH = pKa2 (1.5 equivalents of OH added to arginine dihydrochoride), the concentrations of H2B+ and HB are equal. At the second equivalence point, HB is the predominant species, and pH = (pKa2 + pKa3)/2. The last proton to be lost from the arginine comes from the guanidinium group, and when the pH is 12.1, the pKa of the guanidinium group (pKa3), the concentration of the guanidinium form (HB) equals that of the guanidine form (B). The name of the fully deprotonated form of arginine is called argininate (the -ate suffix due to its negative charge).
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